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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MENE_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHSRPHIC QCLTRLASVK RNAVVTVYGN RKRTGREFVD GVLSLAAGLI RLGLRNGDVV  60
   61 SIAAFNSDLF LEWLLAVALV GGVVAPLNYR WSLKEAKMAM LLVEPVLLVT DETCVSWCID 120
  121 VQNGDIPSLK WRVLMESTST DFANELNQFL TTEMLKQRTL VPSLATYAWA SDDAVVICFT 180
  181 SGTTGRPKGV TISHLAFITQ SLAKIAIAGY GEDDVYLHTS PLVHIGGLSS AMAMLMVGAC 240
  241 HVLLPKFDAK TALQVMEQNH ITCFITVPAM MADLIRVNRT TKNGAENRGV RKILNGGGSL 300
  301 SSELLKEAVN IFPCARILSA YGMTEACSSL TFMTLHDPTQ ESFKVTYPLL NQPKQGTCVG 360
  361 KPAPHIELMV KLDEDSSRVG KILTRGPHTM LRYWGHQVAQ ENVETSESRS NEAWLDTGDI 420
  421 GAFDEFGNLW LIGRSNGRIK TGGENVYPEE VEAVLVEHPG IVSAVVIGVI DTRLGEMVVA 480
  481 CVRLQEKWIW SDVENRKGSF QLSSETLKHH CRTQNLTGFK IPKRFVRWEK QFPLTTTGKV 540
  541 KRDEVRRQVL SHFQIMTSSL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle