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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14210853, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLFLFASL WMLEGALGQL HYTVQEEQEH GTFVGNIAED LGLDITKLSA RRFQTASNSR  60
   61 SPYLELNLET GVLYVNEKID REQICKQSPS CLLHLEVFLE NPLELFRVEI EVLDINDNPP 120
  121 SFPEPDLTVE ISESATPGTR FPLESAFDPD VGTNSLRTYE ITPNSYFSLD VQTQGDGNRF 180
  181 AELVLDKPLD REQQAVHRYV LTAVDGGQPQ QRTGTALLTI RVLDSNDNVP AFEQPVYTVS 240
  241 LPENSPPGTL VLQLNASDPD EGQNGEVIYS FSSHISARAR ELFGIAPRTG RLEVSGELDY 300
  301 EESSVYQVYV QAKDLGPNAV PAHCKVLVRV LDANDNAPEI SFSTVKEAVS EAAAPGTVVA 360
  361 LFSVSDRDSE ENGQVQCELL QGDAPFRLKS SFKNYYTIVT EGPLDREQPG GDAYTLTVVA 420
  421 RDRGEPPLST SKSIQVRVSD VNDNAPRFSQ PVYQVYVSEN NVPGAYIYAV SATDRDQGAN 480
  481 AQLAYSILES QIQGMSVFTY VSINSENGFL YALRSFDYEQ LKEFSFQVEA RDAGEEPQPL 540
  541 AGNATVNIIV VDQNDNAPAI VSPLPGRNGT PAREVLPRGA EPGYLVSRVA AVDADDGDNA 600
  601 RLTYSIVRGN EASLFRMDWR TGELRTARRV PAKRDPQRPY DLVVEVRDHG QPPLSSTAAI 660
  661 QVVLVDGAAE RPGGGGGGAL GAGVGAGGGG GGGEHRPSRS GGDTSLDLTL ILIIALGSVS 720
  721 FIFLLAMIVL AVRCQKEKKL NIYTCLASDC CLGCCCCCPC CSRQARARKK KLSKSDIMLV 780
  781 QSSNAPSNPA QVPVEESGSF GSHHHNQNYC YQVCLTPESA KTDLMFLKPC SPSRSTDAEH 840
  841 NPCGAIVTGY ADQQPDIISN GSILSSETKH QRAELSYLVD RPRRVNSSAF QEADIVSSKD 900
  901 SGHGDSEQGD SDHDATNRGQ SSGMDLFSNC TEECKALGHS DRCWMPSFVP SDGRQAADYR 960
  961 SNLHVPGMDS VPDTEVFETP EAQPGAERSF STFGKEKSLH STLERKELDG LLSNTRAPYK1020
 1021 PPYLTRKRIC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle