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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33340123, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLRGLGVL FLLHVCGSNR IPESGGDNGV FDIFELIGGA RKVPGRRLVK GQDLSSPAFR  60
   61 IENANLIPPV PDDKFQDLLD AVWADKGFIF LASLRQMKKT RGTLLAVERK DNSGQIFSVV 120
  121 SNGKAGTLDL SLSLPGKQQV VSVEEALLAT GQWKSITLFV QEDRAQLYID CDKMESAELD 180
  181 VPIQSIFTRD LANVARLRVA KGDVNDNFQG VLQNVRFVFG TTPEDILRNK GCSSSTNVLL 240
  241 TLDNNVVNGS SPAIRTNYIG HKTKDLQAIC GLSCDELSSM VLELRGLRTI VTTLQDSIRK 300
  301 VTEENRELAS ELRRPPLCFH NGVQYRNNEE WTVDSCTECH CQNSVTICKK VSCPIMPCSN 360
  361 ATVPDGECCP RCWPSDSADD GWSPWSEWTS CSATCGNGIQ QRGRSCDSLN NRCEGSSVQT 420
  421 RTCHIQECDK RFKQDGGWSH WSPWSSCSVT CGDGVITRIR LCNSPSPQMN GKPCEGEARE 480
  481 TKACKKDACP INGGWSPWSL WDICSVTCGG GVQRRSRLCN NPTPQFGGKD CVGDVTENQV 540
  541 CNKQDCPIDG CLSNPCFAGA KCTSYPDGSW KCGACPPGYS GNGIQCKDVD ECKEVPDACF 600
  601 NHNGEHRCKN TDPGYNCLPC PPRFTGSQPF GRGVEHAMAN KQVCKPRNPC TDGTHDCNKN 660
  661 AKCNYLGHYS DPMYRCECKP GYAGNGIICG EDTDLDGWPN ENLVCVANAT YHCKKDNCPN 720
  721 LPNSGQEDYD KDGIGDACDD DDDNDKIPDD RDNCPFHYNP AQYDYDRDDV GDRCDNCPYN 780
  781 HNPDQADTDN NGEGDACAVD IDGDGILNER DNCQYVYNVD QRDTDMDGVG DQCDNCPLEH 840
  841 NPDQLDSDSD RIGDTCDNNQ AIDEDGHQNN LENCPYVPNA NQADHDKDGK GDACDHDDDN 900
  901 DGIPDDRDNC RLVPNPDQKD SDGDGRGDAC KDDFDHDNVP DIDDICPENV DISETDFRRF 960
  961 QMIPLDPKGT SQNDPNWVVR HQGKELVQTV NCDPGLAVGY DEFNAVDFSG TFFINTERDD1020
 1021 DYAGFVFGYQ SSSRFYVVMW KQVTQSYWDT NPTRAQGYSG LSVKVVNSTT GPGEHLRNAL1080
 1081 WHTGNTPGQV RTLWHDPRHI GWKDFTAYRW RLSHRPKTGL IRVVMYEGKK IMADSGPIYD1140
 1141 KTYAGGRLGL FVFSQEMVFF SDMKYECRDS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle