YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7464009
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSTEYQRY GYDYAKYPRR IAEELQRYGG NSFMNFFRDE GVLYKEILCD ACDHLKVNYN  60
   61 KKSDTTLIEE NMLSSILQKS LEKMSDEEIR ELCDELGVKN TNKLGKQALS TAALTLFRMG 120
  121 GFKSYQLALI VANAVIKAIF QRGLSLGANA ALTRGLSILT GPIGWIITGV WTAIDIAGPA 180
  181 YRVTIPACIL VATLRLKAQA NEIKNIL

Type	Start	End	Confidence
Cytoplasmic	1	149	0.77
Transmembrane Helix	150	174	0.73
Non-Cytoplasmic	175	177	0.56
Transmembrane Helix	178	196	0.57
Cytoplasmic	197	207	0.74