YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51243225
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWQKSLTLI VALTLSRGIG LKNDLPWKLK SDMMFFSRVT SGLLVTRSTG QMNVVLMGRK  60
   61 TWESLPAHSR PLKNRINVVI SRQEVLDLGG GAYHARSLDD ALALLSQIYD STSKIQLNRV 120
  121 FVIGGGELYK AAMEHSRLNR IIATVIHNEV DCDVFFPVDF RSSQSCLPWR KQDHSVLEAW 180
  181 VGSKVPQGKI NENGFIYEFE MWIRDI

Type	Start	End	Confidence
Signal Peptide	1	18	0.90
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	206	0.99