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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54650660
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYLNWTKVA IIYEEDYGLF NLMHSSTETK AEMYIRQASP DSYRQVLRAI RQKEIYKIIV  60
   61 DTNPSHIKSF FRSILQLQMN DHRYHYMFTT FDLETYDLED FRYNSVNITA FRLVDVDSKR 120
  121 YLEVINQMQK LQHNGLDTIN GSPYIQTESA LMFDSVYAFA NGLHFLNLDN HQNFYIKNLS 180
  181 CTSDQTWNDG ISLYNQINAA ITDGLTGTVQ FVEGRRNIFK LDILKLKQEK IQKVGYWHPD 240
  241 DGVNISDPTA FYDSNIANIT LVVMTREERP YVMVKEDKNL TGNLRFEGFC IDLLKAIATQ 300
  301 VGFQYKIELV PDNMYGVYIP ETNSWNGIVQ ELMERRADLA VASMTINYAR ESVIDFTKPF 360
  361 MNLGIGILFK VPTSQPTRLF SFMNPLAIEI WLYVLAAYIL VSFALFVMAR FSPYEWKNPH 420
  421 PCYKETDIVE NQFSISNSFW FITGTFLRQG SGLNPKATST RIVGGCWFFF CLIIISSYTA 480
  481 NLAAFLTVER MISPIESASD LAEQTEISYG TLEGGSTMTF FRDSKIGIYQ KMWRYMENRK 540
  541 TAVFVKTYED GIKRVMEGSY AFLMESTMLD YAVQRDCNLT QIGGLLDSKG YGIATPKGSP 600
  601 WRDKISLAIL ELQEKGIIQI LYDKWWKNTG DVCNRDDKSK ESKANALGVE NIGGVFVVLL 660
  661 CGLALAVVVA IFEFCWNSRK NLNTENQSLC SEMAEELRFA MHCHGSKSRH RPRKRSCLNC 720
  721 SSVPTYVPSN VSTSNVGVYY NYFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle