YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573607
Protein type:	Transmembrane
Type Confidence:	0.53
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFIRRSLLS ALTLVGIIGV IYFMSSSSNT IETSINNISS LTKDDLLSKF NQQPQHQQQQ  60
   61 QQQQLSQPAL NKPLEEIDTD ESVEQEPPKK QQPKVVDVLE NKEKFTEIPF MPKMANETLK 120
  121 AQLGNASWKL FHTILARYPD EPSDQERNTL ENYIHLFAQV YPCGDCARHF TKLLAKHPPQ 180
  181 TKNRKTAALW GCYVHNIVNE KLNKPEYDCT TILEDYDCGC GDDEKEKDYT LKGESMDHLR 240
  241 QIKIDSKKDK QRGG

Type	Start	End	Confidence
Cytoplasmic	1	7	0.48
Transmembrane Helix	8	26	0.50
Non-Cytoplasmic	27	254	0.99