YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46443262, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYFQTEKTT ETRQQRQQKK RPVRNSIICT LSLSYQPNFV MSSLIGWLSS WFQNEPITPE  60
   61 LKKEIESNIN SHKVLVYSKS YCPYCTSTKT LLQSLNQDYK VIELDQIPKG SAIQNGLQEL 120
  121 TGQRTVPNVF INGKHIGGNS DIQALHSQGK LKPLFG

Type	Start	End	Confidence
Cytoplasmic	1	25	0.55
Transmembrane Helix	26	47	0.53
Non-Cytoplasmic	48	156	0.99