YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573678
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWFGGGSGS SSTPPSKVSI VTEYKPEEKT QQYLEDLPPK FEDSEPIPER QATLMDAAQR  60
   61 IKLSDFTVDR FISMPCFREA MITGFQAMGV LGVVTFLIHK NVQKTMNWSV GGFFLGNIIG 120
  121 WEQCRSLRRK SFQMIEKAQQ ERDEKNKKKW AEMQQSDDED LKKFQEFNSR K

Type	Start	End	Confidence
Cytoplasmic	1	79	0.91
Transmembrane Helix	80	99	0.90
Non-Cytoplasmic	100	105	0.82
Transmembrane Helix	106	124	0.80
Cytoplasmic	125	171	0.86