YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.10457, orf...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIYNHGLK QTQTITKDLT QFEKNLSTSP LSLQGAITTS LTAFRKTIKE YSDLLEKNVN  60
   61 DTSYTKHENR LNKFNQDLNE FTSKFDTLKK QRDIQVQEAN KQELLGRRHI STTATAALGS 120
  121 TSSDNPYESS SNPSQQQQQQ LQDEQNTMSY REGLYHEKNS LERGSEQLDR ILEMGQQAFE 180
  181 DIVEQNEILR KVQTKFEESL ITLGVSQGTI RSVERRAKQD KWLFWFCVVV MLVVFYYIVK 240
  241 LFR

Type	Start	End	Confidence
Cytoplasmic	1	221	0.78
Transmembrane Helix	222	239	0.98
Non-Cytoplasmic	240	243	0.60