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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10446, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNDNNNHY YDPNQQGGMP PHQGGEGYYQ QQYDDMGQQP HQQDYYDPNA QYQQQPYDMD  60
   61 GYQDQANYGG QPMNAQGYNA DPEAFSDFSY GGQTPGTPGY DQYGTQYTPS QMSYGGDPRS 120
  121 SGASTPIYGG QGQGYDPTQF NMSSNLPYPA WSADPQAPIK IEHIEDIFID LTNKFGFQRD 180
  181 SMRNMFDYFM TLLDSRSSRM SPAQALLSLH ADYIGGDNAN YRKWYFSSQQ DLDDSLGFAN 240
  241 MTLGKIGRKA RKASKKSKKA RKAAEEHGQD VDALANELEG DYSLEAAEIR WKAKMNSLTP 300
  301 EERVRDLALY LLIWGEANQV RFTPECLCYI YKSATDYLNS PLCQQRQEPV PEGDYLNRVI 360
  361 TPLYRFIRSQ VYEIYDGRFV KREKDHNKVI GYDDVNQLFW YPEGISRIIF EDGTRLVDIP 420
  421 QEERFLKLGE VEWKNVFFKT YKEIRTWLHF VTNFNRIWII HGTIYWMYTA YNSPTLYTKH 480
  481 YVQTINQQPL ASSRWAACAI GGVLASFIQI LATLFEWIFV PREWAGAQHL SRRMLFLVLI 540
  541 FLLNLVPPVY TFQITKLVIY SKSAYAVSIV GFFIAVATLV FFAVMPLGGL FTSYMNKRSR 600
  601 RYIASQTFTA NYIKLKGLDM WMSYLLWFLV FLAKLVESYF FLTLSLRDPI RNLSTMTMRC 660
  661 VGEVWYKDIV CRNQAKIVLG LMYLVDLLLF FLDTYMWYII CNCIFSIGRS FYLGISILTP 720
  721 WRNIFTRLPK RIYSKILATT EMEIKYKPKV LISQIWNAIV ISMYREHLLA IDHVQKLLYH 780
  781 QVPSEIEGKR TLRAPTFFVS QDDNNFETEF FPRNSEAERR ISFFAQSLAT PMPEPLPVDN 840
  841 MPTFTVFTPH YSEKILLSLR EIIREDDQFS RVTLLEYLKQ LHPVEWDCFV KDTKILAEET 900
  901 AAYENGDDSE KLSEDGLKSK IDDLPFYCIG FKSAAPEYTL RTRIWASLRS QTLYRTVSGF 960
  961 MNYARAIKLL YRVENPELVQ YFGGDPEGLE LALERMARRK FRFLVSMQRL SKFKDDEMEN1020
 1021 AEFLLRAYPD LQIAYLDEEP ALNEDEEPRV YSALIDGHCE MLENGRRRPK FRVQLSGNPI1080
 1081 LGDGKSDNQN HAVIFHRGEY IQLIDANQDN YLEECLKIRS VLAEFEEMNV EHVNPYAPNL1140
 1141 KSEDNNTKKD PVAFLGAREY IFSENSGVLG DVAAGKEQTF GTLFARTLAQ IGGKLHYGHP1200
 1201 DFLNATFMLT RGGVSKAQKG LHLNEDIYAG MNAMMRGGKI KHCEYYQCGK GRDLGFGSIL1260
 1261 NFTTKIGAGM GEQMLSREYF YLGTQLPLDR FLSFYYGHPG FHINNLFIQL SLQVFILVLA1320
 1321 NLNSLAHEAI MCSYNKDVPV TDVLYPFGCY NIAPAVDWIR RYTLSIFIVF FISFIPLVVQ1380
 1381 ELIERGVWKA FQRFVRHFIS MSPFFEVFVA QIYSSSVFTD LTVGGARYIS TGRGFATSRI1440
 1441 PFSILYSRFA DSSIYMGARL MLILLFGTVS HWQAPLLWFW ASLSALMFSP FIFNPHQFAW1500
 1501 EDFFLDYRDF IRWLSRGNTK WHRNSWIGYV RLSRSRITGF KRKLTGDVSE KAAGDASRAH1560
 1561 RSNVLFADFL PTLIYTAGLY VAYTFINAQT GVTSYPYEIN GSTDPQPVNS TLRLIICALA1620
 1621 PVVIDMGCLG VCLAMACCAG PMLGLCCKKT GAVIAGVAHG VAVIVHIIFF IVMWVTEGFN1680
 1681 FARLMLGIAT MIYVQRLLFK FLTLCFLTRE FKNDKANTAF WTGKWYNTGM GWMAFTQPSR1740
 1741 EFVAKIIEMS EFAGDFVLAH IILFCQLPFL FIPLVDRWHS MMLFWLKPSR LIRPPIYSLK1800
 1801 QARLRKRMVR KYCVLYFAVL ILFIVIIVAP AVASGQIAVD QFANIGGSGS IADGLFQPRN1860
 1861 VSNNDTGNHR PKTYTWSYLS TRFTGSTTPY STNPFRV

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