YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4910, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISNLIPAY LLPFSLFCQV LGAPTNGKRG NVVVVKVKTT VQQTQTDIQT ISEATGTTTN  60
   61 YLINTSTETF TRYTATVTST VYGVPHTYTT VATTPVSAAD VIPNSENEVK SSPTESPVEQ 120
  121 ETSTSSTSVA TTTTPVAKNP VSSQETSTPT PVPPETTSTS SSLLSSSQQT TTLAQVSETA 180
  181 INDTTESSGP TITGSVSSQT TDSWIIENIS TVTSDGTCFV NYDYYYATET DDAEETTTLT 240
  241 STITTTVTLN

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	250	0.99