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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4900
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEKLTIKRS RQKVIAYSVI IIWLMIVNIW LLNNYHLNSS TLTRHGNGDN LIDEDDDSSS  60
   61 SSEYSIYNEL DTENYLGQQH QEEDVPNSQS TDNSLIKPTS PGKNSFKDDI TIKILQKHLQ 120
  121 KQQNNPKDIR TKDSHAEIYN QIFENHPQID TILGNLNFNQ RCQLFFQNLF IKDNNWILNV 180
  181 KDKKIKLENK NDFKFNDFKK SHLNEFKRQF KTMKKLLEPN KIIHNKDFDN SIEFQDFIKM 240
  241 KYEQFWNRTM TYEQKIVDSI SILRIFNKCY LIEEATSTTT TKNNKQDFIK DQFKLVDGIR 300
  301 RASKKNPSLP KFKPTKQEQM VNFDNENLSP SILEHRVYPW LSFEYPVYER WTGKVQYQPP 360
  361 KMANYVKDGN QKTTKKTKYN NDKYLSSFFL NRLKQKCNGR GLVLSISDLH VDVTVRLIHL 420
  421 LRALNNRYPI QIVYYDNLSK ETKEKIVTAA REVMSHVPKS FERVAKYFPD DYLDNDQGGL 480
  481 PKQEIWFINT YNVIHADYKL QFRGFANKFL ATLFNSFDEF ILLDADTVLT QSPSYFFNLP 540
  541 QYLETGTFFY KDRTTYETRP KSDSIFFEKL GPSVIDSVMF NIPIMTSYTL NRSFFKGLFH 600
  601 YMESGLVVLN RDMHYSSFLT MVQMNFFEPV NSRIHGDKEI FWLAMAINGK QNYYFDENYA 660
  661 AAVGVMTPDI ERTKPDKTLH ESKELCSPHP GHISHDDNSL VWLNSGFFYC GQNDKVKFVE 720
  721 EFKHKSRLKH LNTLEAFKTF YYSPLRIENA IIPPMDLDIW AANNEDEPAK GWFGDPRYCS 780
  781 GYMWCAYDKI GGKTKSGKNT RLEGKIINFD EQAQDLFNYY GDVWVGME

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle