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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12335, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFRLFSLL IVQFIINTTV AVSPVSAVLP KSSFSPFDSP EFCSQIITPT CNTTFTYIDE  60
   61 LNKDIRPYLS ELVKTSYFRY FKVNLDKQCR FWNAQHFCAS ENCAVEILED FNWSQVTNES 120
  121 LKPSGLGKIS LPDKSSIDNS IETEEVQTCE DLDYSEIDDD HHCVYVNLVN NPERFTGYGG 180
  181 NQSFDVWKAI YSENCFPNTN PMSMTNDADN GGEQCIEKNL FYRVVSGMHA SIAVHLSREY 240
  241 LNSETGEFYP NLKVFMERVG MHNDRLSNIY FNYALVSQAI VKLSEILPLR EFIQSGYDDI 300
  301 TPAQKQHLLA NNDVESVEVY DRLLLDDIIP SLEANVVFNT SNLFDNSNLR DEFRSRFRNI 360
  361 SAIMDCVGCD RCRMWGKIQT IGYGTALKIL FEDDNYDNHN LKFRRIEIVA LINTFDRLSK 420
  421 SIESINMFKE MYLQHLKDVA EGLTQPGVYD KIQNNKPGNG FAFPFVSPLP QKKPDQTNTP 480
  481 KNQQQKQPQE TDKKRLTLEE IAHTKPEDRT FIEDFRLSFD EVWQALRFVL TSYQRFPAVL 540
  541 SRFTLVQLNE WWNKLLGKPT VYEYESAIDV DAQQYSQVIG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle