YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4862
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSYTAIEP DEPLDSPPSY SANDHNTTTN TTTNNPSTQP HVNQPQADQP QQPGTSSSSE  60
   61 PRTLLQRLKE SSHPIALLFY IFFRVSPIVT YIFGTIVIHQ FTSKNTFILH FIVLILLVAG 120
  121 DFWNLKNISG RLLVGLRWWN ETTLIESENG NGNGNASGQV GESAKDFENV WVFETADPNR 180
  181 YINPIDSKGF GFYYMDNQ

Type	Start	End	Confidence
Cytoplasmic	1	75	0.98
Transmembrane Helix	76	98	0.91
Non-Cytoplasmic	99	105	0.85
Transmembrane Helix	106	125	0.94
Cytoplasmic	126	198	0.97