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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4805, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAPSSVST STIISTLLAN LALFGVFVGC FIVLRLKFKR IYSPKSSFDL VPEEKKPEPL  60
   61 PKDPFRWIFI LLTKPDSFFL QQAGLDGLVF LRYIKTFGTL FLCALLMYII LLPVNATNGN 120
  121 HNKGFDQLSI ANVKHPRRYY AHVLMGLVFN GIVIFVIYRE LFFYNSLKNA VLSSPKYAKK 180
  181 LSCRTVLFQG VPDSLLDEKQ AFKIFNGVKR VYVARTAREL EYKVEKRAAM VTKLENAENK 240
  241 LMKMAVKSKL KADKKGIILE PVDEISSYVS EKKRPKMKVG GFFSSKVDTI RHCQEQIPIL 300
  301 DKEVKKLQKK FRHSMPLNSI FVEFENQYYA QLAYQSTVHH NPMRMSPRFI GLEPKDIIHS 360
  361 NLRMFWWERI TRRFLAFAAI VALVVFWAIP VAAVGTISNI TFLTNKLPWL RWILKMPHAL 420
  421 LGLVTGLLPT ILLSLLMFLL PIIIRVFARI SGEISAVGVE KWTQNAYFAF LMVNGFLVTA 480
  481 LASSATATIT EIIDKPTSAM SILANKLPLS SNFYISYLVL QGFSIAGGSL FQVVGLFLYY 540
  541 ILGTLFDNTV RKKWNRFSGL GTVAWGTVFP IFTQLASITL AYSIISPLIL VFAFASFFLV 600
  601 YVAYAHNITY CFVEGPDAFG SHYPRALFQT FCGIYLGEIV LLGIVVVGKG WGPIVIQVIV 660
  661 LLATIFAHVH LNLAFDHLLD VVPLDAMRAV DGVSSTASYT GPSEYESKVL NKKKRRANFE 720
  721 KELLKEQEEE SKLKADVKAQ MESDYDQEEA IDTTSVVPLL ADRDFKTTES NNPIVRFIRP 780
  781 DVFLNFRYVK RILPATYNVE PKIVDNKHAY DAPAISAKCP GVWFPADPMG LSEIEIEQLS 840
  841 PIVDISTKNA TFNEKGKIVF LGKPPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle