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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4784
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKFIINFAN IHCDKCEGII RNVVSRYYKI SDETDLNANI KPSEVIFKLE NNEVTLYGND  60
   61 LIDFHGDIKS IIKSLGKSGF DILSWDLHNG DETVSSSQIV NTNIQGANEP DGFIDIVGMY 120
  121 HKFINSRNKK KHMKYCKVCQ ESQQHKKKST DSDFSSSSED TVVEIPHQEF RASFLVTGMT 180
  181 CASCAQSITD NLRSILGESK NEDEPNFSVN VIQQSVVVII PNKQIINKIV DAINDMGFDC 240
  241 KLIEVLPVQR SVNTKVTALI GGMTCAACAN SIDSAVKELP FILESVINVV TKAAQFVLED 300
  301 DGGSNIAKLK ETIEDCGFDF ELLSTEKVNY TSGKQKPRSI NLKVNGMFCN HCPDIITQYL 360
  361 TNYGDAVVIN DPISLDHPVI KFTYVPSQTL KTRKILFDLN HLKDDGNGGY TITPDEKGAF 420
  421 ECEIIKPVTV DEHVRKLAHR EVLGLAIRLA IATLFAIPTF IFGIVAMSLL PKHHPFRVWV 480
  481 EDPLWVGNVS RNSWILFIFA TPVYFFAADT FHRKAIKEIK SLWFHKNSFK SRLLKFGSMN 540
  541 LLMSLGTTVA YFASIVLIGL SATQKPMTHH GLHTTYFDSV VFLSFFLLIG KLLQSYSKSK 600
  601 TADAISELSK LKQTEATLIE DDKDTRVDIQ LLEIGDQIRI GTGESPPVDC VLVEGSTEFD 660
  661 ESALTGESTP VKHQEGHQIF SGTVNIGNSS VVGKVTSLEG DSLLNQIVNT VRDGQMRKAP 720
  721 MERTADLITG YFVPLIIACA VITWVIWLAL GYSGALPQSY LDIDVGGWTV WSLEFAIAVF 780
  781 VVACPCGIGL AAPTALFVGS GLAAKNGILA KGGGVAFQDG ANVNIVCFDK TGTLTKGELT 840
  841 ITDFHFPDKS SIAKTFALQA ARDLEVPSHH PLGKAVKSFV TSYDGKSLTA NKIPQVETVP 900
  901 GKGLRGQIIY DEGDDIWNEY KPTQAILGNE KLMEENDIEF TEKERQWLKK WKGECKSVIL 960
  961 VGLQCESYFK DSKFHLALIM AARDQLRPET KKVIEFLKHK DIECWMITGD NKLTADAIAK1020
 1021 EIGIENVVSE VLPDEKEAQI KKIRQLNSGG KKEPVIAMIG DGINDAPALA SADVGIALSS1080
 1081 GADLAVTSSD FILLNKIHPL VSLATLLDIC SKVFQRVKLN FGWSLVYNLI ALPIAAGVIY1140
 1141 PYKNSRLDPV WASAAMALSS VSVVLSSLAL KLYKPSLKAE DFGVDDSTES ELSPNEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle