YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.12229, orf...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFQTLLVVA GSLVASTLAV NSTVTEHHTT EITITHCSDN KCATSVAPAV QSVNTVTIEG  60
   61 VVTEYTTYCP LTASEHKHKE SSSPSSVAPV ASTESVVTTT ISGVHTSYTT YCPLSGSSEA 120
  121 STVITPGTVA GESSSSSEEV SYVDVTSTPV VESTTDVELT LTAQSTLFTS YANSTGSSSS 180
  181 SSVVPSANVT TFEGGAVGGA SNQITVGFAA IAGLAAILL

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	219	0.97