YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4759, orf1...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMRSLQRAA TKANTASITT SILRFNSTVA KSTSAAPRAL SNAYIGNLES RWTSLPKQDQ  60
   61 QTLIDELKSR MELPWQELTP AEKKAAYYIS FGEWGPRTPL YLPGERSQVF WITTGCIVAS 120
  121 VVLFFGIRQF ASPPPITMNK EWQEQSDDYL KSKNANPFTG YSQVQ

Type	Start	End	Confidence
Cytoplasmic	1	108	0.66
Transmembrane Helix	109	127	0.92
Non-Cytoplasmic	128	165	0.68