YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4758, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKQIITSSS TKSTRLFTSS TLKYLSTSSS LLKPTLAAAA AASITTTTTT TDNSSEYLTT  60
   61 GGSTHSIPAK GFRLSQPKTW EESNESALSK ATKFLFLSEI ARGMYICLEM YFRAPYTIYY 120
  121 PFEKGPISPR FRGEHALRRY PSGEERCIAC KLCEAICPAQ AITIEAEERI DGSRRTYKYD 180
  181 IDMTKCIYCG YCQESCPVDA IVETPNVEYS TATREELLYN KEKLLENGDK WEQELQYCID 240
  241 ADAPYR

Type	Start	End	Confidence
Signal Peptide	1	41	0.96
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	246	0.99