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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4744
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNVFKVENV ILNRRGYHIP GTLILSSFHL VFSFTSNTST STNPKEIWIC YPMIEKMSKA  60
   61 RGSSWINHNN GNSSKTRNTG SQVDNTPKIV MKGFDHYSAS HIRLQCKDFT YYSFDFMNDL 120
  121 ICSEVFTKLS SLITISKTEN DIKQLYAYSY KPNMLEQNLD VKGWQLYNPI EEYQRLELVQ 180
  181 ENSQYWRVTN LNTEYKFSPS YPKVLIVPST ISDNVLKHAG KFRSKQRIPA IVYKHKSGIN 240
  241 GNVIARCAQP LVGLNIQNRS IQDEKLIGEI FLCQERERKD KIDNSCGKSN NVDDEFQREQ 300
  301 PQRNLLVDLR PVTNAMAQHA LGAGTENVDY YRGKQNLNSK ESSKDKGDGE SISSQRIRHI 360
  361 DKIFCNIDNI HVMRDAVNKL SSILNDLDRY PAIYDKSSAS AALLQQALTK TQWLNRLSII 420
  421 LQSVDRITKS IHLNNTNVII HCSDGWDRTS QVSALSQLCL DPYYRTLKGF MILVEKEWTS 480
  481 FGFKFATRAD HGGCIGAIMK KEIKSASVQD ENNQNESNSG QSLESSMYGE SPQNDNSQSV 540
  541 TSIGSGAAAS VSSFFQRAAR AAREIKNTAQ NGLSSSPSPE DGADGSGYTS SSSIYSGSSE 600
  601 KSPIFHQFLD CVYQIYRQNP TQFEFNSRFL KRLFYHYYSC QYGSFLCDSE KELYEVYKVQ 660
  661 DSTVSVWDYF NSRPAEFLNK SYTNDTIEDN DGVIFFNFAD LKWWFELYGR SDEEMNGLSN 720
  721 SLDRKFAQMG LNRKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle