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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4738, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.53
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYIWHALVY ISCLSSCVLS QENSSDTSTS LVNKSDLYTP RSNRTLDYSP LIQYIPVFFQ  60
   61 KNYSSIDTPH NNDFLALQSP ATTQTDSNKN SQKNDSVLDE CHFMSFEEWK KQKIESNTTT 120
  121 SNNYSMNGSS ESKSITPSNH SSVISTNVTL MEADGKVYKD KFNFASVDCA ATIMKTNAQA 180
  181 KGASAILKEN KDSYLLNECS VKHKYVIIEL CQDILVDSVV IGNFEFFSSI FKDIRISVSD 240
  241 RFPSQNWKEL GQFTASNIRD VQTFKIENPL IWARYLKLEI LSHYGNEFYC PISIVRVHGK 300
  301 TMMDEFKEDE EGNQHMGAIK EEEPPTPQTI EEDVLLINQT TLNECRVRLP HLQLNEFLKS 360
  361 FNSSNQEFCV PSDAEPQVTT AKTTTAITTQ ESIYKNIMKR LSLLESNATL SLLYIEEQSK 420
  421 LLSTAFSNLE KRQTTNFNTL ISSVNSTLMN QLMVFKESYY ELYEQYGNLF KMQENSHRQL 480
  481 LAETNKKVGL LSSELTFQKR VSIFNSIIII CLLVYVILTR DVAIEYPEDE LNEKSPSPQS 540
  541 KKLSSPFIPI RYKKSKKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle