YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.13394, orf...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDQNWKNLS NELRRRAEQA RSSSNMKSPK SPLGIFGGIG GLLLLGGATM FIQNALFNVD  60
   61 GGQRAILYSR LDGVQSKIYP EGTHFVIPWF QRPIIYDVRA KPKEIASLTG TKDLQMVNIT 120
  121 CRVLYKPDIW QLPTIYRTLG LKYEEKVLPS IVNEVLKSVV AQFNASQLIT QREKVSRLVR 180
  181 ENLVRRASKF NVLLDDVSIT YMTFSPEFSQ AVEAKQIAQQ DAQRAAFVVD KAIQEKQQLV 240
  241 VKAQGEAKSA ELIGEAIKKS KDYVELKRLD TAREIANILA ASPNRIILDN DTLLLNTVTD 300
  301 NRK

Type	Start	End	Confidence
Cytoplasmic	1	32	0.89
Transmembrane Helix	33	52	0.93
Non-Cytoplasmic	53	303	0.94