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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13324, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNEKYASDF PNSHYLSNLN NLNGTNQSIH LNRLPTLGEI LANKSKSPVD LFTFYQFMKD  60
   61 VEGKIDYLDF WFDLINHLNL CKHYVKGLRD SIIRQSSTFH QQQQQSQQQQ QQQGHRIISS 120
  121 SQPQPQSQDL SYESPATATG FRNSMAVSEK SNRKSLSSSI LLDLIINDNI LEENDSHRLS 180
  181 AFLRGDINLD NLDPKLKDLI EQYNAEIEPN SKHSSRVDSV ARSSPSYVSN PIMGSAPIAN 240
  241 PQQPYLHQDR KTSSHSLLLH DDDENNHSYY ENQLDIGRAD KAVSASKYIS LQSENKDVFG 300
  301 KEQENERFQH PTNPFADTSA INNQKKRAST INPSLLEKLI KDSPASNGTH SFITRENLRE 360
  361 SSHQLLLKYF VEDSEKNLNL PSNLNSQIIK AIEVDGRDDP DVFNYVKNFV FNKLENEHLP 420
  421 KFLDFMATRN INHSNFWRII LGFFFLFIGF WVSFIMVFLN YRKGLRPVII IPYFLAFYFL 480
  481 ISSIYLIDPV MAWMGISETF SKSNGRSLMK IREKFIYRFI VKRSLWVLFL VLIFTAIFTV 540
  541 LFSLVPGHRL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle