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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4707, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQANFLLAFI CFAAAAVIAQ VVPNVEQLKA QSLQKRDEDL MEPVFKNLPS KDYDYIMYQL  60
   61 KQLQIAKGNV SKCDQCKNKM RFVKKLIDEK PEKAHLTTLM MYKDCVLSTT PYMYCTIGNF 120
  121 FVTTKAYTDK KFDQKFESGI DGYEVVDFLD NDFLDFLGRF NTSDEFDLEY YCHAQMGSCD 180
  181 LPDLEAVVDS FNIESWWPEK KPQHYSEPKY NKTNRERFNV LHMSDAHIQF TYEQGTEAKC 240
  241 SQLVCGLTKS FNKKLVEQNY NFTSAFAADN PNKSPKDFKF SFYPDAHYDG QKYVKGEYYD 300
  301 FPKSRGWNFN FQPATVFGAY LSDTPEILVN NSLIEMAKMH KDKNFEFALY NGDTAEHDLQ 360
  361 SVTVDLVKSE EIRTFKTMRQ YLNGIPVLPS MGNHDTAPYG LLAPLRLDYN NSYRWNNDEM 420
  421 VDVWIGNEWF KQSEKQTMKD HYAAFSYETE RGLKVITLNS NTYYQSNTWR FLNASSDPDL 480
  481 FGGWKFLVDE LIESEKKNQR VWISAHVPPN KDDVMPIDSL IFQKIVQRFA PYTIANLYYG 540
  541 HTHNDQKIVA YSDAKSPKPN QPITSAWVIQ SLTPFGNHNP AFRYYEVEDE SFNIMNSFNY 600
  601 YTKLNETYVN GGEEPVWEYE YSARAAYDPN NEWPVSAPLN ATFWDKFAIS KMKDPTNIKF 660
  661 NQMYTDYQYR FSPYTPNCTH PSGKNITTSC YVNNYCNAAN LDIVSVEECM KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle