YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.12103, orf...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFGRKAAER LANRSILITG ASSGIGEACA KVFAEASNGQ IKLILGARRK ERLIKLSDTL  60
   61 IKQYPNIKIH HDFLDVTIKD SISKFIAGIP TDFEPDVLIN NSGKALGKEQ VGELKDEDIT 120
  121 EMLDTNVVGV IRMTQAVLPL LKKKNYADVV FIGSIAGRVA YKNGGGYCAS KAAVRSFVDT 180
  181 FRKETIDTGI RVIEVDPGAV LTEFSVVRYK GDTEAADAVY TGTEPLTPED VAEVVVFAAS 240
  241 RKQNTVIADT LIFPNHQASP DHVYRKPN

Type	Start	End	Confidence
Signal Peptide	1	30	0.80
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	268	0.99