YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12061, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQEELSLFR ITTGYFFLLW YIIILVAAYS GFFEILFNFR NRPILHTKQQ ANHQNDPESD  60
   61 DEEIYEGVTI IRPIKGIDPE LTSCLESSFC QNYPRSKLQI LFCVDDPNDP SIPIIQKLIA 120
  121 KYPTVDAQIL TSESYNSQTK TSDDHYGPNP KVNNLAKGFV HAKYDILWVM DSNVWASSNI 180
  181 LKNSVISLNG NLNMSRKMGQ SRPVKLVHHV PLALSINNTT RSDDFIGGQD LEITAMTPVP 240
  241 SSESLNSQLV KRKSSPKSNN SLNVHPGFTY SKFSKKLGAE LDEMFLHTSH SKFYVSLNNL 300
  301 AVAPCVNGKS NIYRRSDLDQ SVRLIPHKDS PFFKDPKVKQ DAGYYTSLGV GHAIKFFARY 360
  361 IGEDNMIGIA LWENTQGRTG LTGDVVVQPY SGSENNAVKD YIQRRVRWLR VRKYMVLLAT 420
  421 LIEPTTESII CGIYGTYAIS TVFFGTWFNK YWFVMHMLIW MLTDYVQYHT LINHTLDVKN 480
  481 ITYLPNWLNE SIPPKQRNCL QWGYIWILRE LLALPIWIIA MIGHEIDWRG RPFRIKKDLT 540
  541 AEEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle