YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sp\|Q5AMT2\|BGL2_C...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIKFLTTLA TVLTSVAAMG DLAFNLGVKN DDGTCKDVST FEGDLDFLKS HSKIIKTYAV  60
   61 SDCNTLQNLG PAAEAEGFQI QLGIWPNDDA HFEAEKEALQ NYLPKISVST IKIFLVGSEA 120
  121 LYREDLTASE LASKINDIKD LVKGIKDKNG KSYSSVPVGT VDSWNVLVDG ASKPAIDAAD 180
  181 VVYSNSFSYW QKNSQANASY SLFDDVMQAL QTLQTAKGST DIEFWVGETG WPTDGSSYGD 240
  241 SVPSVENAAD QWQKGICALR AWGINVAVYE AFDEAWKPDT SGTSSVEKHW GVWQSDKTLK 300
  301 YSIDCKFN

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	308	0.99