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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CARA_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSATKRYLA TAAAAAATNT TTTSKAFTNT TSQLGRATLT IKDGPVFNGY SFGANRNVSG  60
   61 EAVFTTSLVG YPESMTDPSY RGQILCFTQP LIGNYGVPSS TAKDQFNLLK YMESPKVQCI 120
  121 GIVVADAALE YSHWTAVESL QQWCKRSGVA AITGVDTRQL VSYLRDKGSS LGRITIGEEY 180
  181 DADEDAAFED PGAINLVHKV TTKAPFHIAC PPQYSKGIHI AVLDCGAKEN ILRCLVERGA 240
  241 SLTVFPYDYP IDKIANKFDG IFISNGPGDP THCSTTVNNL KKIITNHQDL PIFGICLGHQ 300
  301 LLALASGAKT IKLKYGNRAH NIPAIDLITG NCHITSQNHG YAVDANTLSE NWQPYFTNLN 360
  361 DLSNEGMIHK YQPIFSTQFH PEAKGGPLDT SFLFDKFFDN INVYKKSNGL NLPPVENSLL 420
  421 VDILPKERVE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle