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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5005, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASIPSNP ILIVGGGLAG LSAAHQAYLR GANVVLLDKE SFLSGNSGKA TSGINGALTR  60
   61 TQVNLKIPDS VEQFYQDTLA SAKDRAHPEL IKVLTYNSAD AVHWLQEVFD LDLTVVSRLG 120
  121 GHSQPRTHRG HDAKFPGMAI TYRLLERLET LSETEPDRVV ILKNSQVIDL IMEQDNKVVG 180
  181 VKYKNLKDKS KHELYGPVIL STGGYAADFT KNSLIRKYRP DIIDLPSTNG GHATGDGQKI 240
  241 VQKNKGQVLD MDKIQVHPTG LISYKDKDIV ERKKTPRFLF LGAEALRGEG GIIFNSKGER 300
  301 FVDELGTRDW VSGEMDKQIK QGNFPIRLVL SEKAGENLKF HVKHYTQRGL MRTVSGKELV 360
  361 EEMGCSEDIV KQQLDTYNKA ASGAIKDPFG KKYFPATPFE YSPDAKYHVS FITPVLHFTM 420
  421 GGVKINDKTQ VIADNDSPFE GLYAAGEVAG GVHGHNRLGG SSLLACVVYG RLAADQASSY 480
  481 KFHKLSFGDG DSIASASQRL KMINLHIDPS NGRIFIDTNG NGGEGNTAST STPDNGGSSS 540
  541 SAAAPPPPPQ KKAPKQPKPF SVPDKEFTAE EVAQHNKPGD CWCIIKNVVL DLTPFLGDHP 600
  601 GGKESIANFA GRDATESFAM LHDDDFIPKY VANCVLGRLK GKTSELQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle