YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21214566
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLVTRAQA AANSAFTSSI VITSVVIVLT LLQLYKDNVW SLNTTSITNI RPTASIKQSF  60
   61 HYGSLNRKPK ENAKIQFDLS SDLTPLFNWN TKQIFIYLTA EYPGKSEGSS NKVTFWDKII 120
  121 TNKEDANLTL TNQRGKYSVW DVEKSFRGRN ATVRLEWNIQ PYVGPLIFGS TEGFGEFQFA 180
  181 DTQKKKESTK NT

Type	Start	End	Confidence
Cytoplasmic	1	11	0.60
Transmembrane Helix	12	35	0.74
Non-Cytoplasmic	36	192	0.78