YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4024, orf1...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKKIYDRFR PIIFVISILN FFENCITLFL TPSSKLQLFL STMFTGLVET IGTVLDYSKH  60
   61 DDSSTGGDGV SITIGNCSEI LEDVKLGDSI STNGVCLTVT EFNLGKTLFK VGVAPETLRR 120
  121 TNLGDLKHGA PVNLERAVTS EVRLGGHIVQ GHVDTIAKIV DKKPDGNAIA YTFELRDKEF 180
  181 INYIVHKGFI AIDGASLTVT NVDPSKVQFS IMLISYSQEK VILAKKEVGD TVNIEVDLTG 240
  241 KFIEKQVEIN LTGQIENSDS PLNKLISSLV EKKVKEYIK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.87
Transmembrane Helix	12	31	0.94
Non-Cytoplasmic	32	279	0.97