YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.11488, orf...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVGLTGGI ACGKSTVSKE LKDRYGLTIV DADLVAREVV YPNKPAFNKI VAAFGDEVPN  60
   61 LINEDGNLNR AALGQAVFGN KEKLAILNSI VHPAVKWEIF KQIIRAYFSL NKLVILDVPL 120
  121 LYESGLSLLC GLTVTVSCER NVQIERLLAR NNELSESDAN KRIESQMSNK ERNYRSDIVL 180
  181 DNSGSLDSLK ESIKCLVPEM KPNLIWYLLD LFPPFAVTSA LFTFTIRRIA ERFKGTKPKS 240
  241 D

Type	Start	End	Confidence
Non-Cytoplasmic	1	205	0.84
Transmembrane Helix	206	226	0.69
Cytoplasmic	227	241	0.60