YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.11455, orf...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEFGVSFTA GGIFFFVFGI MTFFDSALLA LGNVLFIIGI TLIIGPQRTI AFFSRPTKLR  60
   61 GTICFILGIL LILLKYAFIG FILESFGILG LFGDFFGTIV QFLRSIPYIG DVLSHPLIAP 120
  121 TIDRLAGISN TLPV

Type	Start	End	Confidence
Cytoplasmic	1	4	0.57
Transmembrane Helix	5	24	0.73
Non-Cytoplasmic	25	26	0.44
Transmembrane Helix	27	45	0.85
Cytoplasmic	46	60	0.69
Transmembrane Helix	61	79	0.92
Non-Cytoplasmic	80	85	0.58
Transmembrane Helix	86	106	0.63
Cytoplasmic	107	134	0.64