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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11423, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVVVSGGV ISGIGKGVLA SSTGLLFKTL GLRVTSIKID PYMNIDAGTM SPLEHGECFV  60
   61 LDDGGEVDLD LGNYERYLNI TLTRNHNITT GKIYSHVIEK ERNGDYLGKT VQVVPHITNA 120
  121 IQDWIERVAR IPVDDTGLEP EVCIVELGGT VGDIESAPFV EALRQFQFRV GNENFALIHV 180
  181 SLVPVIHGEQ KTKPTQAAIK DLRSLGLTPD MIACRCQEEL EHATIEKIGM FCHVGPEQVI 240
  241 AVHDVNSTYH VPLLLKQQKV MNYLTKRLAI GEIDKQSLAK GEALLSKWRH LTSSHDKSFE 300
  301 TVTIALVGKY THLHDSYLSV IKSLEHASMR CNRRLKIEWV ESSDLEEDTK KENLSKYHKA 360
  361 WHFVCQADGI LVPGGFGSRG IEGMVAAAKY ARENNVPYLG VCLGLQIAVI EFVRSVLGVS 420
  421 HSTSMEFDSN IEEKDASVVY MPDVDQVKLG GTMRLGIHQT KFVQDSEWSN LRKLYGGADA 480
  481 VYERHRHRYE VNPLLIDDIE KRGLKFIGKD ETGKRMEMIE LKDHKFFVGT QYHPEYLSKV 540
  541 LDPSRPFLGL VAAAAGILED VLSRDDLNYK GEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle