YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.3920
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFNYLLALF QILVLASARA QADEYASDPN IFELTPSNFD KVVHKSNYTT LVKFYAPWCG  60
   61 YCQKLQPVYH KLGKYINKDA KYSINIASVN CDKDYNKQLC SQYQVRGFPT LMVFRPPKYE 120
  121 KGKQVKLQKH ASEVYQGERT VKSITKFLTS RLKNYVKKFH NIRSDGIAEW LAEDIPSVLL 180
  181 ISNANSVSPL LKSIAIDFLD RVNVGMISKF NDESHKFVIG DKEIEVPATS KSSLFYFNKE 240
  241 KGELVAYTKS DKLNDKIKIT EWIIEQTQQQ PIEGPLSKKE KKYYYKYRTG KKKIEHDEL

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	299	0.99