YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.1723, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQKSIKVCV FCGSSFGNKP VYAEEASKFG KALADKKWGL VYGGGSTGLM GAVASGCATN  60
   61 GGYVHGIIPE ALISRERTVD EEAFNAKLKS SIDNHDGSTP IPDSKQYGKT TLVKDMHTRK 120
  121 RLMAQEADAF VALPGGIGSI DELAEITTWC QLNIHGKPIV VYNVDGYYDN FFKMIQGFVD 180
  181 CGFLSEKNGQ IIKVANSVEE VLEIIENYEI PEGRFNLKWE TT

Type	Start	End	Confidence
Signal Peptide	1	23	0.77
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	222	0.95