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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9287, orf1...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLSFNLFI IFIINLGYVN SFLIPTKGLN LFHLQQQQQQ SIFSTNLKQA LTTPPPNSFY  60
   61 DWLVFQKQVC LKSILNNIGG DFTIDNKDLL PGVVIASPST SNPDYYYQWT RDSAIIINIL 120
  121 IDHLSQTPLH LINKNSTSSL VHIIESYIFN TQILQQLPNL SGNVDNLENL GEPKFHVNLT 180
  181 AFNESWGRPQ RDGPGLRSIA IMNYLSLLNN TQHQPSFSNL TMNNTSKIYH DIIKPDLKYS 240
  241 IEFWQFEGFD LWEEIKGIHF FTSLVQLKSL TMGLKFAQFY NDSFEFRLDI MNSIELLTKY 300
  301 IELESGFINN EDSDGDEDNE QQLLSKSYII SSPKLFYTKS RSGLDIASIL AVLYTHNNNN 360
  361 ANDDDDNDFP FDVDNGLVLT TLRYLIQDMT LRYPINFQDN FQGVALGRYP EDIYDGYGKS 420
  421 EGNPWFISTA TASELIYRLI YKLKSNNQAI IIDQKNIEFY KEFIHSVSAT EISNNELKFE 480
  481 AHINGHPMMI INKDDKLYDE LINKLFHYAD GFLKVVQKHV DNNGDMNEQF NKYIGFMQGA 540
  541 EKLTWSYGAV FTAINWRNKT LSIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle