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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9238, orf1...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAVNSARLL NRAIISRPVL YRSAIPRHFS TYTPLAFRTS RQLFNKSNND NKKSNNNDHE  60
   61 KDSERKPKKD QNKDEEEQLR EELKKKFAAK HPGTNPDNLK IYKFDLRTLG NYVLLFGSTI 120
  121 LTFYLINRTS ESEIQQLTFQ DFITNYIEKG LVTKLTVVNK AVVEAELIPG AVSNISHNRN 180
  181 GKPYVVFTIG SLEFFEDEMN KVQDRLKIPI NERLPVVYED HTSWLSYIMP ILPTVLLIGG 240
  241 LYYLTMRRMP GGAGGAGGAG GPGGIFKIGK SKAKLFNQEN EVKIKFKDVA GCDESKEEIM 300
  301 EFVKFLQDPH KYEKLGAKIP RGAILSGPPG TGKTLLAKAT AGEAGVPFLS VSGSEFVEMF 360
  361 VGVGASRVRD LFKTAREMAP AIIFVDEIDA IGKERGNGRM GGNDERENTL NQLLVEMDGF 420
  421 DTTDHVVVLA GTNRPDILDK ALLRPGRFDR HISIDVPDVE GRKQIFKVHL NKLKLKSVQD 480
  481 IDAKQKDVDF SKYQQLKNEE IEKLAGRLAA LTPGFAGADI ANCCNEGALI AAREDAPAVD 540
  541 TYHFEQAIER VIAGLEKKSR ILSPEEKKTV AYHEAGHAIC GWFLQYADPL VKVSIIPRGQ 600
  601 GALGYAQYLP KDQYLTSQEQ FKHRMIMTLG GRVSEELHFD TVTSGASDDF KKITQMAQQM 660
  661 ILKLGMSDKL GQICYDTSSD NGNGFKVHHN YSETTARIID EEVKRLIDES YEACHKLLTE 720
  721 KLDLVDKVAE ELFKKEVLTR EDMIKICGPR PFPERNDAFD KYLQGEDAFK GKPKSKDQNS 780
  781 NDDGASSPSS APETA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle