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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1648, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHIEKLFSF ILLFIALPSP ASFIRMSSIY KLSIKGVRAF HPESDETIQF GFPLTLICGQ  60
   61 NGCGKTTVIE CLKYATTGTL PPNSKGGAFV HDPSLSSRTA VTGQIKLAFK NVNGKSMITT 120
  121 RSVQASSKST KSATGATVTF KTLEGQLAII EKGDKISVSS KNAELDAQIP VYLGASPAIL 180
  181 ENVIFCHQDE SLWPLSEPSA LKKKFDDIFE ASKFTKVLDN FKSIKKDMAT DIKLIEQSVN 240
  241 HLKIDKERAK KVQDKLHNMN ESVEKYTEEI TDLNIQIEKK EKQAEELFAT NQEFQRTLSD 300
  301 YENLLTKKQA LEEQIERLKT SIEILPDNDE ELLNRQENFS AITTEKSNRI DDLQLQSTKL 360
  361 SDELKNKTKQ YNELIRLDGS FKAKKAEYDS NWEKLSEIVD KNAKDFNVQI SNDRVRNIAM 420
  421 FKTELNKRHN TLLNEQKDLL VDNKRKESER QSALQDVLNS ISREEQHHEY ATNVINTNNE 480
  481 KLSVLKRKVE VGSNNEIELE EKRNDLELTM KLLQEKKDLN EVRKLDAKIM ECNTEISKLE 540
  541 FELDELAKKL STSNKQSDLR SKVLFLEESA KSKKAELSKI FATIDSSYFD VLGSKLDVDV 600
  601 GESLLSQKIS NLEIKSEEQQ KKVGSLESEL QINKNSIESI LKTIEENNSK IDSLKSNITK 660
  661 VIGEDEINDY ENVVNDLEDS YRNVSEDVNS AEVTRDFKNS AISFAEENKC CLLCKRLFEQ 720
  721 GGLGSFIQDL KQSVDEHKIQ EIREQSLEIK KELEDVKSIN LEVINYRECL ANVQNFECKL 780
  781 KELVDKSSQI ENELEQQRKE QQTIKHSLDN ALSLKKPLSD ATRIHLEVSE IEFQLDELNE 840
  841 DLSGFGGSVV SVDELQKQQQ DINLKIKKTR QDLNDYTESK YKAQRELQKL ENRVKDTKLQ 900
  901 ISNLERSLAE VTGIKNNISE AEDIVRSSEE KLKQIKTSLE ELQVDKQVKS NALRDTQNSN 960
  961 RDTEQEMQQE VEKCHQLLTS FTSLNDAVTY FETNIADKYE ANALEMKELS EQCTSLETKI1020
 1021 DDHAQEIKSL EKEVMDASRI EHNILANIDY RSQLSRLEET ELQLGSMDIE DAQSRKEEYQ1080
 1081 VESKKLRDAL SSLTAEHAGK IGEVKQIKDQ IASLKKELET EYKNVNQSYH EEWIKLQTNL1140
 1141 LVSNDIQIYS KALDNGIMKY HSMKMEEINR ILNELWSQTY KGSDISTIAI KSDVNLQAKG1200
 1201 NRSYNYRVVM VKESSELDMR GRCSAGQKVL ASILIRLALA ECFGANCGMI ALDEPTTNLD1260
 1261 AENAEALAAA LNRIIEYRKS QSNFQLIVIT HDEKFLTHIQ GDRFTDHFYR IQRDESSKSR1320
 1321 IYSLPIGRIQ EG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle