YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1609
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKSAAKK AREAAAAAAA TATTTNSTEN AKDIKFEKPS LQKLPQNKKT LSPSKESDLD  60
   61 SDESLSSSSS SEEEDEYGDL ITEDVETGIN QVLQTIKTDP SKLLDPNVKF FEDPESIEYN 120
  121 ETTKKHKPLY ITDYNRMQLL EKAKGEKHHE DEEGENGSVP FDDQKTIDGQ KSFVTVQKEE 180
  181 KDQLLAEIKK AFDEDVEDDS DSDSDSDEKE QAENNDDDDF FRKKEGKRSK NEEDKEEIAV 240
  241 GGSGSNLPDP NQDQQGFLNA FLDSKAWIPK KGDKIINLDK IDQTDEEEFD DAVEKFENAY 300
  301 NFRYEDPNGG AEIISYARNQ ATLRRSKTNS RKRQREKRQE LKRQENEIVQ DLLKKKKTAT 360
  361 VNKVMDRLSK IKQAIGGDNI NVDDKTIERV FGDSLLNDDF DDADWDNKMA EIFNEQYYEA 420
  421 ELEKPTWDDD DDEIMGGDIN SDEEDEEEQE EEEEEKEEDN ASEEPPHKKS RKDLLKAKKS 480
  481 AKKEKQSLKE KAQAIVEANT LKLMDEIEEE RGRQRENEHG KEIKFKYREV SPETFGLTTR 540
  541 DIILADDKQL NNFISIKKFA PYRPKELRLK DKRKYTKKKH LQEWKKETFK NLKLPKEIEQ 600
  601 NGNDDNSNEI WIPNEDGFDT NYSNKGKNDK KKHNKSKSKS KTKSKTKTKK HDDKSENKND 660
  661 LKISSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle