YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.2948
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDRSVTIG VLALQGAFRE HIAYFKHLIE SNPDEYAVYD FDIKEVRTKE DLELCDSLVI  60
   61 PGGESSSMSY IAERTELLPH LYKFVSDESK SVWGTCAGLI FLSKQLINGI ENQRVLGALD 120
  121 IEVSRNAFGR QIDSFEQSLD FSSFIPGCTD FPTVFIRAPV VTKILNQKDS LKEGVIRSNN 180
  181 SYQNQAPVKV LYSLKNYDGK DHELIVAVQQ GHILGTSFHP ELAEDYRFHK WFLDEFVIKK 240
  241 SKQYIDRII

Type	Start	End	Confidence
Signal Peptide	1	19	0.59
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	249	0.99