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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.834, orf19...
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLGLFHNYI FLVILSLKII PINAYSPYNS SFTSEHIRYL QNETQALFDH SWKSYMKYGF  60
   61 PFDEITPISC EPLGPDFDDY ENTVRNDARG NISSMVLDNI DTLIIFERWD ELEYILKYLS 120
  121 DNKQDFFNQD TVVQVFETCI RHLGGLLSAH LLLTDITNKP ITLSTKYQPL REISNKYNGF 180
  181 LLDMAHDLGL RLIPSYQTST TNIPLPRINL AYGLKKVPPK LQRDACTSGV MTPVLEFTLL 240
  241 SRLTGDRQFE YYSQLSFWKL WSSKSALNLL PMTIDPIANQ WKDSITGIGA SIDSFYEYAA 300
  301 KSAILFNDDY MWTVFKTSYR ALLSHSAQGG KGTMIFPNVG IYDGVVFSPW IDSLGAFWSG 360
  361 LQVLTGQLQD AIKTHVVYLK IWDFFDSIPE RWIYNHQHHH QGNKKVKRNK KKFKAEDSID 420
  421 LEWYPLRPEF IESTYYLYRA TKDPMYLQIG ERVLNLLGDR YKAPCGLSGL QDVRTAERQD 480
  481 RMESFVVGET LKYLYLLFDT KDEIFLHNST IMQNKNWIFS TEAHPLWLNK KIDLIGDSLT 540
  541 QSSNEISSAI MGEKPYHKNS LKPNKDLLKI PNSAFIRNIT LPQPELVDIE GITEDVSHIA 600
  601 KKSPFAGRFD TCQLNPWNKS VDSFLESSYY KWPYLFNADY AFENSFRKPR YLSQTNLDGS 660
  661 YIELTKEFYN KFTMFNGANL ICPRTSTTAV YEVFWGDIKQ CEYIEVSEIY HTKFSNESLM 720
  721 APGDIWIPSL NGLRVVLEEL VPGKVDTFNN VVTEEQLLAL QDSNNNEDYN NNNDDYRIRL 780
  781 VNSGLRIKRV NGVVIGEGVT LWTLPFEPSE QSNEEDGMIG ITEDARVVIQ GKVVENLFVW 840
  841 YG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle