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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.849
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLKRALLS PKLFVKSILL FTIVYTIYLS TSTSTSVYLS TTQSKLNIYT NQLYQKINLQ  60
   61 FNQWYYNILV YDYNLFSDSN FQQQLTIIKS EKLQDENHKI DLWNLDDSFN LPVSVKVPNY 120
  121 LLSPSSSSSS STDKKPLIQP FDPRLTLSVY YNYIETNKDN GNDLKLPFHW SDWVDFSKLH 180
  181 KYILNPSKTD LCSSLFDISN NDKLNKDSEI KSVDQYCQFI GNANNGNENK ATNMLGYKIF 240
  241 APAQAQTGAN HELIGKSYLY TQAPSPKRLI FLTNTNGNYQ FDVDNYNVNN ISNSILYNEK 300
  301 LTSNLASKVN KENEQSSTLN VLSSYISLIK NSPPSLLPTK QQNNPKDNEI DSHIIEIPEE 360
  361 YFINDPQSII NQLESSNSQL SNSEKDFLSS IKYSVDCKDP PKYFYEAKYV KAMKENWSGE 420
  421 HYDWRFYNGL TIHNAQQQSI ILHRLLKNYL KFTQSNNLIT WIAHGSLLSW YWNGINFPWD 480
  481 TDIDVQMPIH ELYQLARFYN QSLVVENAGT KRLGNSDKTE EFEFDGMGRY FIDVGSSVTH 540
  541 RTKGNGNNNI DARFIDIDTG LYIDITGLAL TNEESPDRYN DFLTIDQNTD AGKQKFDQLK 600
  601 QNQKDGDKNN NYSLKNQQLK LYNCRNNHFS SYNELSPLIQ TVVENQPGYI PKNFMYILND 660
  661 EYNLKSLAKK NHRDFTYFNN FNLWLNTKDV SKYLAHKHSP NENSPDGSNQ AYSLIKFNKL 720
  721 SKSDHINLLK YNPIMMKEYL ETMNFTNYHN LELSQLLKIS NYNHNHNNAQ TNVSNIGIYR 780
  781 ESYDLFNHYR NNYKLGYSLR PDHFINFIIH DNSRWDYQLQ VDDLIKLQKQ LENDSQQQQE 840
  841 QHHEQQQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle