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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.841
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTETESKK TEGGDTSSHV FGNALQTWVE IDLPSLQKKL DEQGIELKED QKASLLSRKN  60
   61 LASKTKEFKK LEDSEKLNQF KSLLKLYQNE IDNLTNKNKM VENYFFGIYR SLAEAPDPRP 120
  121 LLEMSLDSVI ESKETLSLRK EVDRLTDELA KRADYDNLKQ RLLQNEQKAA ELLSLKLNAK 180
  181 EDEFKSIIDE KESNWLEKEN NLKDQIKIAQ RQIEELRTSN EVTELKLDNQ NKQTGRDGVS 240
  241 ASTLAELEIV TRDAEASKKR VFELEKRNED LRRELSKSQN DIEIKSIKED YSKRVSELEG 300
  301 ENVLLVANLN QTRKKLQDSD KEHALKTDSL NRDISSMELE IKNLKAQLDK ASDYEEIKSE 360
  361 LQLLRQIEFG HGDDDDDDDE TGNANAKVDS ILIERNKSLT QQLADHRAQH DDLNSKIVSL 420
  421 EAQVESSLAE VNRLRELNEK LENDLTNLQD VTSNNRFNDN ASLISGMTRM TRPNGRNGSI 480
  481 ISGQPGNNFG SGLGIVAEDS PSILPIITKQ RDRFREKNNE LEEELRKQLN LVNELKRQNN 540
  541 SLKKDNEELY ERTRYLASFQ TPGTRNITTT SSGRKFLNPR PNTDIESNPY QQSYESKLHP 600
  601 IEQFRMREQE RINSRLSPLE RLFISITRAV LATRTTRMLF LAYCLGLHIV VMFVTIYAMN 660
  661 LSTALIPEVG KNTSTGGIAS NKVISDVSSG KVANPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle