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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4322
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIRYDYFK ESGGSDGGSP TRTIISYKRF IYVGTLLAIL IYGSSFLITT IENFTLKFES  60
   61 QSISSIDSFK GERPDYASPS SKSTDFKGKI PFSKEVYDKH ILSPKLHSIQ WIRAPESIHD 120
  121 DRGTYVIKED KDDKGFRVVV KSIADEEYEK ELIGNSIFKY KGEEHEIVDY FASPDLQKVI 180
  181 LKTDVTSLWR YSSIAYYWVL DINNGDIKPV FNDVDKISTA SWSPDSSKIA FIYENNLYYK 240
  241 SLQHDEIVQI TFDGSTEIFN GKPDWVYEEE VYGSDHVFWW SPESDKVAFL RSNNTQVPEF 300
  301 IIPFYAQSDH QDYPEIVKIK YPKAGYPNPI VDVLTYDLNT KNLHNHHLKS EKINLENRLI 360
  361 TEVVWIGDSL KVKTSNRHSD LLEIFLVDKH EKVNLIRTLT ASDSWFEATS STLYIPANKT 420
  421 LGRKYDGYLD IVVENGYNHL AYFSPPDNSE YELLTKGNWE VTGGVTFDFT SNTVYFTSTA 480
  481 KSPIERHIHS INLLDRSDNG LPYIKDITTK EGWYQSSFSS GARFLFLSEL GPGVPTQRVN 540
  541 DLKMHKNVKT IEDNSELVET LRNYVVPEVK YSQVELDDKE TGQPFLVTAM ETLPLNFDKT 600
  601 KKYPVLFYIY GGPGSQTVTK KWALSFSSLI AAELDAIVVT IDGRGTGFNN LNYKLGSKFK 660
  661 FIVRDRLGQY EPIDVISAAN KWAEKSYVDP ERIAVWGWSY GGFLTLKTLE TDIDNPIFNY 720
  721 AVAIAPVTRW RLYDSIYTER YLNTPQENPK GYETGSIHNV TNFKHVKKFF IGHGSGDDNV 780
  781 HVQNSLQLLD EFNLAEVENF EFMIFPDSNH GMNYHNGFNV VYDRILDFFK RAFDWEFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle