YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.2769, orf1...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNKKLTGL ILLAIISIIT LFNFKTISQI TAIRSFVSPA SSTATNTNTK STMSDSKGYI  60
   61 ITLKDTCADS EASSIKSKIT ELGGKITNEF SLIKGFSAQL PTIHAEALPK DFAGIANIEE 120
  121 DGEVRTQ

Type	Start	End	Confidence
Cytoplasmic	1	6	0.59
Transmembrane Helix	7	27	0.66
Non-Cytoplasmic	28	127	0.86