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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2690, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPRNGRLIM KSRALPLRTF VLLRSSAHNT HFKNVSTFVP TRNLGFLKVL TRAVKMPAYI  60
   61 GGTMAAGGTY VAYKVEQASS YTQDKLSAFK DFADGVFDKT GDFFKNLGGT DGATGGNGAE 120
  121 DGASSGGAGG GGGGGGGGND TATAVGATAA AVGLTSDEDE STEAETDIEE EDEETLIEDD 180
  181 SDDDDDLAND ETDDHMLNLT RQMIEIRNLL SSLNHDGIKL PSIVVIGSQS SGKSSVLESV 240
  241 VGQEFLPKGS NMVTRRPIEL TLVNTPEAAA NVAEFPALKM YNLTDFQQVQ KILFDLNMAV 300
  301 PASECISNDP IQVTIRSPTV PDLSLVDLPG YIQVEAADQP IELKTKIREL CNRYLEPPNV 360
  361 ILAISAADVD LANSAALRAS RLADPRGERT IGVVTKLDLV DPEQARKILL NKKYPLKLGY 420
  421 VGVITKAPHP KASASGLFSR KQVTGYQAFV AQQNFEHTFL KENKEAFFGC TVGTRNLKKK 480
  481 LMKVLEKTMA ASLRPTHLAI QQELEETSYQ FKVEFNDRPL TPQMYLANNI DMLKLGTKDL 540
  541 SHNFSRNELK AILKNALDQK VLDLMAERYW NKPFELKGSS VEPDLRELTQ INIDNDIYWH 600
  601 KKLDLTTSSL TKLGVGRLST NLITNALLTE IDNLVDNTQL RNHPMAKSAV RDAARSVLGN 660
  661 KYYSTADQVE NCIKPYKYEI ELEDREWQTS KENAVTLLKE EMRQCEEVYH DLKSQVGGRK 720
  721 LQQVVTYLEK LKQSNNSDVD LTTNETLGFS PTLIQRGKEA IFLKERISLL KMRYQFVKNS 780
  781 KKCKKKESKY QCPEIFLDAV ASKITSTSIL FLNVELLSDF YYNFPRELDL KFFNNLSKDE 840
  841 IEKFAKEDPK IKKHIELQER KDLLENALSK VESVLAVQRT TQKDNTEDRN KKSVFGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle