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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2686
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGLPLDENF RSNKRKSIII GSVVFVALLV TLFSTNLFNY LKIVTTPIPK ESSLCPLYEP  60
   61 IAPESYYKDN STVLEILHDK KYKKESIKRL AGAIQVDTQV FDKQPAVDDA PQVWAKFAKF 120
  121 HDYLEQTFPL VYKNLKVTKV NTYGLVYHWK GSDKSLKPVL LTAHQDTVPV QKDTLKDWTY 180
  181 PPFEGHYDGE YIYGRGAADC KNVLIAILET LELLLAKGYQ PKRSILAAFG FDEEASGYHG 240
  241 AAHIGKYLEE TFGQDSVYAL IDEGAGLTVQ ELTNTIVALP GTAEKGYVDI QVELTTPGGH 300
  301 SSIPPDPTSI GIISELGYII EKDPYSPLLP PENPILNFAQ CLALHDPKNN IPSSFKKAIL 360
  361 RAGYDKFANS KLVEGISKNR LTKYLIRTSQ ALDIINGGEK ANALPEHVKL LVNHRVAIGT 420
  421 SVAEVQEHFV SRVVEVAKRH GLSVSAFGKD VLKVKNDSGL FNVTNFAGFL NAAPVTPTND 480
  481 TVWEYLSGVT RHVYEDLVFP EIKYPVITAP AIMTGNTDTR HYWNLTRNIF RFTPAFIGDF 540
  541 IGETHIHSVD EKLPFDSHLQ LQAWFYEYIQ AIDSAKANNK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle