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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10187, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDKLDLYV IVTLVVAVAA YFAKNQFLSK PQDTGFLSND GAGGSSRNIL ETLKKNNKNT  60
   61 LLLFGSQTGT AEDYANKLSR ELHSRFGLNT MVADFADYDF DNFGDITDDI LVFFIVATYG 120
  121 EGEPTDNADE FHTWLTDEAD TLSTLRFTVF GLGNSTYEFY NAIGRKFDQL LEEKGGERFA 180
  181 EYGEGDDGTG TLDEDFLSWK DGVFDSLKNN LNYEEKELKY EPNVKLTERD DLTVDDSNVS 240
  241 LGEPNKKYIN SQGVDLSKGP FDHTHPYLAK ITKTKELFNS KDRNCVHVEF DISDSNLKYS 300
  301 TGDHLAVWPS NSDENIKQFL KCFGLEDKEN TVIELKALDS TYSIPFPSPI TYGAVIRHHL 360
  361 EISGPISRQL FLSIAGFAPN EETKATLTRI GNDKQEFAST ITRRKFNIAD ALLFASKGKA 420
  421 WVDVPFEFII ENVQHLTPRY YSISSSSLSE KQLINITAVV EAEVESDGRA VTGVVTNLLK 480
  481 NIEIEQNNTN ETPVVHYDLN GPRNKFSKFK LPVHVRRSNF KLPKNTTTPV ILIGPGTGVA 540
  541 PLRGFVRERV QQVKNGVNVG KTILFYGCRN EHDDFLYKQE WSEYASVLGD KFEMFNAFSR 600
  601 QDPSKKVYVQ DKIVENYKIV NELLNNGATI YVCGDASRMA RDVQAAIAKI VAKDRDISQE 660
  661 SATELVKSWK VQNRYQEDVW 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle